The 5.0 version of ProteinPilot is provided as a free download on our software library. Our antivirus scan shows that this download is virus free. The program's installer file is commonly found as ProteinPilot.exe. The most popular versions among the software users are 4.0 and 3.0. The file size of the latest downloadable setup file is 485.7 MB. This tool was originally developed by Applied Biosystems MDS Sciex. ProteinPilot is included in Education Tools.
From the developer:
ProteinPilot is a program that streamlines protein identification and quantitation, enabling you to identify hundreds of peptide modifications and non-tryptic cleavages simultaneously. It provides support for protein isoform and protein subset differentiation, as well as false positives supression using the embedded, Pro Group Algorithm for protein-grouping analysis.
You may want to check out more software, such as SatCalc, MathMatic or MemBrain, which might be related to ProteinPilot.